Browse by PML Authors

Chrismas, N, Allen, R, Allen, MJ, Bird, K and Cunliffe, M 2023 A 17-year time-series of fungal environmental DNA from a coastal marine ecosystem reveals long-term seasonal-scale and inter-annual diversity patterns. Proceedings of the National Academy of Sciences, 290 (1992).

Hongthong, S, Leese, HS, Allen, MJ and Chuck, CJ 2021 Assessing the Conversion of Various Nylon Polymers in the Hydrothermal Liquefaction of Macroalgae. Environments, 8 (4). 34. https://doi.org/10.3390/environments8040034

Evans, CT, Baldock, SJ, Hardy, JG, Payton, O, Picco, L and Allen, MJ 2021 A Non-Destructive, Tuneable Method to Isolate Live Cells for High-Speed AFM Analysis. Microorganisms, 9 (4). 680. https://doi.org/10.3390/microorganisms9040680

Schiano di Visconte, G, Allen, MJ and Spicer, A 2021 Novel Capsular Polysaccharide from Lobochlamys segnis. Polysaccharides, 2 (1). 121-137. https://doi.org/10.3390/polysaccharides2010009

Pagarete, A, Ramos, AS, Puntervoll, P, Allen, MJ and Verdelho, V 2021 Antiviral Potential of Algal Metabolites—A Comprehensive Review. Marine Drugs, 19 (2). 94. https://doi.org/10.3390/md19020094

Buchholz, HH, Michelsen, ML, Bolaños, LM, Browne, E, Allen, MJ and Temperton, B 2021 Efficient dilution-to-extinction isolation of novel virus–host model systems for fastidious heterotrophic bacteria. The ISME Journal. https://doi.org/10.1038/s41396-020-00872-z

Teague, J, Allen, MJ, Day, JCC and Scott, TB 2020 A Review of Current Coral Monitoring Tools/ Diagnostic Methods & Introducing a New Tool to the Coral Health Toolkit. A Review of Current Coral Monitoring Tools/ Diagnostic Methods & Introducing a New Tool to the Coral Health Toolkit. https://doi.org/10.20944/preprints202008.0045.v1 (Submitted)

Jones, ES, Raikova, S, Ebrahim, S, Parsons, S, Allen, MJ and Chuck, CJ 2020 Saltwater based fractionation and valorisation of macroalgae. Journal of Chemical Technology & Biotechnology, 95 (8). 2098-2109. https://doi.org/10.1002/jctb.6443

Parsons, S, Allen, MJ and Chuck, CJ 2020 Coproducts of algae and yeast-derived single cell oils: A critical review of their role in improving biorefinery sustainability. Bioresource Technology, 303. 122862. https://doi.org/10.1016/j.biortech.2020.122862

Mayers, JJ, Landels, AR, Allen, MJ and Albers, E 2019 An energy and resource efficient alkaline flocculation and sedimentation process for harvesting of Chromochloris zofingiensis biomass. Bioresource Technology Reports, 9. 100358. https://doi.org/10.1016/j.biteb.2019.100358

Beacham, TA, Cole, IS, DeDross, LS, Raikova, S, Chuck, CJ, Macdonald, J, Herrera, L, Ali, T, Airs, RL, Landels, A and Allen, MJ 2019 Analysis of Seaweeds from South West England as a Biorefinery Feedstock. Applied Sciences, 9 (20). 4456. https://doi.org/10.3390/app9204456

Parsons, S, Allen, MJ, Abeln, F, McManus, M and Chuck, CJ 2019 Sustainability and life cycle assessment (LCA) of macroalgae-derived single cell oils. Journal of Cleaner Production, 232. 1272-1281. https://doi.org/10.1016/j.jclepro.2019.05.315

Raikova, S, Allen, MJ and Chuck, CJ 2019 Hydrothermal liquefaction of macroalgae for the production of renewable biofuels. Biofuels, Bioproducts and Biorefining. https://doi.org/10.1002/bbb.2047

Raikova, S, Piccini, M, Surman, MK, Allen, MJ and Chuck, CJ 2019 Making light work of heavy metal contamination: the potential for coupling bioremediation with bioenergy production. Journal of Chemical Technology & Biotechnology, 94 (10). 3064-3072. https://doi.org/10.1002/jctb.6133

Warwick-Dugdale, J, Solonenko, N, Moore, K, Chittick, L, Gregory, AC, Allen, MJ, Sullivan, MB and Temperton, B 2019 Long-read viral metagenomics captures abundant and microdiverse viral populations and their niche-defining genomic islands. PeerJ, 7. e6800. https://doi.org/10.7717/peerj.6800

Raikova, S, Knowles, TDJ, Allen, MJ and Chuck, CJ 2019 Co-liquefaction of Macroalgae with Common Marine Plastic Pollutants. ACS Sustainable Chemistry & Engineering, 7 (7). 6769-6781. https://doi.org/10.1021/acssuschemeng.8b06031

Day, J, Scott, T, Allen, MJ, Willans, J and Teague, J 2019 Hyperspectral imaging as a tool for assessing coral health utilising natural fluorescence. Journal of Spectral Imaging. https://doi.org/10.1255/jsi.2019.a7

Landels, A, Beacham, TA, Evans, CT, Carnovale, G, Raikova, S, Cole, IS, Goddard, P, Chuck, C and Allen, MJ 2019 Improving electrocoagulation floatation for harvesting microalgae. Algal Research, 39. 101446. https://doi.org/10.1016/j.algal.2019.101446

Abeln, F, Fan, J, Budarin, VL, Briers, H, Parsons, S, Allen, MJ, Henk, DA, Clark, J and Chuck, CJ 2019 Lipid production through the single-step microwave hydrolysis of macroalgae using the oleaginous yeast Metschnikowia pulcherrima. Algal Research, 38. 101411. https://doi.org/10.1016/j.algal.2019.101411

Warwick-Dugdale, J, Buchholz, HB, Allen, MJ and Temperton, B 2019 Host-hijacking and planktonic piracy: how phages command the microbial high seas. Virology Journal, 16 (1). https://doi.org/10.1186/s12985-019-1120-1

Piccini, M, Raikova, S, Allen, MJ and Chuck, CJ 2018 A synergistic use of microalgae and macroalgae for heavy metal bioremediation and bioenergy production through hydrothermal liquefaction. Sustainable Energy & Fuels, 3 (1). 292-301. https://doi.org/10.1039/c8se00408k

Evans, C, Payton, O, Picco, L and Allen, MJ 2018 Algal Viruses: The (Atomic) Shape of Things to Come. Viruses, 10 (9). 490. https://doi.org/10.3390/v10090490

Sivri, N, Allen, MJ, Jones, M, Seker, DZ, Durmus, T, Balci, M and Balkis, N 2018 Distribution of enteric bacteria by means of GIS and detection of Escherichia coli with uidA gene in Kapıdağ Peninsula of Marmara Sea. Indian Journal of Geo-Marine Sciences, 47 (7). 1495-1501.

D'Adamo, S, Schiano di Visconte, G, Lowe, G, Szaub-Newton, J, Beacham, TA, Landels, A, Allen, MJ, Spicer, A and Matthijs, M 2018 Engineering The Unicellular Alga Phaeodactylum tricornutum For High-Value Plant Triterpenoid Production. Plant Biotechnology Journal. https://doi.org/10.1111/pbi.12948

Teague, J, Allen, MJ and Scott, TB 2018 The potential of low-cost ROV for use in deep-sea mineral, ore prospecting and monitoring. Ocean Engineering, 147. 333-339. https://doi.org/10.1016/j.oceaneng.2017.10.046

Raikova, S, Le, CD, Beacham, TA, Jenkins, RW, Allen, MJ and Chuck, CJ 2017 Towards a marine biorefinery through the hydrothermal liquefaction of macroalgae native to the United Kingdom. Biomass and Bioenergy, 107. 244-253. https://doi.org/10.1016/j.biombioe.2017.10.010

Teague, J, Scott, T, Sharma, S, Graham, G and Allen, MJ 2017 An Alternative Method to Niskin Sampling for Molecular Analysis of the Marine Environment. Journal of Marine Science and Engineering, 5 (2). 22. https://doi.org/10.3390/jmse5020022

Beacham, TA, Sweet, JB and Allen, MJ 2017 Large scale cultivation of genetically modified microalgae: A new era for environmental risk assessment. Algal Research, 25. 90 - 100. https://doi.org/10.1016/j.algal.2017.04.028

Nissimov, JI, Pagarete, A, Ma, F, Cody, S, Dunigan, DD, Kimmance, SA and Allen, MJ 2017 Coccolithoviruses: A Review of Cross-Kingdom Genomic Thievery and Metabolic Thuggery. Viruses, 9 (3). 52. https://doi.org/10.3390/v9030052

Weynberg, K, Allen, MJ and Wilson, W 2017 Marine Prasinoviruses and Their Tiny Plankton Hosts: A Review. Viruses, 9 (3). 43. https://doi.org/10.3390/v9030043

Landels, A, Cagney, N, Bauer, L, Beacham, TA, Balabani, S and Allen, MJ 2017 Development of Vortex Bioreactor Technology for Decentralised Water Treatment. In: Vortex Structures in Fluid Dynamic Problems. INTECH.

Coma, M, Martinez-Hernandez, E, Abeln, F, Raikova, S, Donnelly, J, Arnot, TC, Allen, MJ, Hong, DD and Chuck, CJ 2017 Organic waste as a sustainable feedstock for platform chemicals. Faraday Discussions, 202. 175-195. https://doi.org/10.1039/C7FD00070G

Cagney, N, Zhang, T, Bransgrove, R, Allen, MJ and Balabani, S 2017 Effects of cell motility and morphology on the rheology of algae suspensions. Journal of Applied Phycology. https://doi.org/10.1007/s10811-016-1033-y

Chuck, CJ, McManus, M, Allen, MJ and Singh, S 2016 Feedstocks for Aviation Biofuels. In: Biofuels for Aviation. Academic Press, 17-34.

Wagner, J, Bransgrove, R, Beacham, TA, Allen, MJ, Meixner, K, Drosg, B, Ting, VP and Chuck, CJ. 2016 Co-production of bio-oil and propylene through the hydrothermal liquefaction of polyhydroxybutyrate producing cyanobacteria. Bioresource Technology, 207. 166-174. https://doi.org/10.1016/j.biortech.2016.01.114

Raikova, S, Smith-Baedorf, H, Bransgrove, RM, Barlow, O, Santomauro, F, Wagner, JL, Allen, MJ, Bryan, CG, Sapsford, D and Chuck, CJ 2016 Assessing hydrothermal liquefaction for the production of bio-oil and enhanced metal recovery from microalgae cultivated on acid mine drainage. Fuel Processing Technology, 142. 219-227. https://doi.org/10.1016/j.fuproc.2015.10.017

Raikova, S, Smith-Baedorf, H, Bransgrove, R, Barlow, O, Santomauro, F, Wagner, JL, Allen, MJ, Bryan, CG., Sapsford, D and Chuck, CJ 2016 Assessing hydrothermal liquefaction for the production of bio-oil and enhanced metal recovery from microalgae cultivated on acid mine drainage. Fuel Processing Technology, 142. 219-227. https://doi.org/10.1016/j.fuproc.2015.10.017

Nissimov, JI, Napier, JA, Allen, MJ and Kimmance, SA 2016 Intragenus competition between coccolithoviruses: an insight on how a select few can come to dominate many. Environmental Microbiology, 18 (1). 133-145. https://doi.org/10.1111/1462-2920.12902

Wang, H, Butt, L, Rooks, PA, Khan, F, Allen, MJ and Ali, ST 2016 Characterisation of algicidal bacterial exometabolites against the lipid-accumulating diatom Skeletonema sp.. Algal Research, 13. 1-6. https://doi.org/10.1016/j.algal.2015.11.012

Hamilton, ML, Warwick-Dugdale, J, Terry, A, Allen, MJ, Napier, JA and Sayanova, O 2015 Towards the Industrial Production of Omega-3 Long Chain Polyunsaturated Fatty Acids from a Genetically Modified Diatom Phaeodactylum tricornutum.. PloS one, 10 (12). e0144054. https://doi.org/10.1371/journal.pone.0144054

Atkinson, S, Thomas, SF, Goddard, P, Bransgrove, RM, Mason, PT, Oak, A, Bansode, A, Patankar, R, Gleason, ZD, Sim, MK, Whitesell, A and Allen, MJ 2015 Swirl Flow Bioreactor coupled with Cu-alginate beads: A system for the eradication of Coliform and Escherichia coli from biological effluents. Scientific reports, 5. 9461. https://doi.org/10.1038/srep09461

Jensen, CN, Ali, ST, Allen, MJ and Grogan, G 2014 Exploring nicotinamide cofactor promiscuity in NAD(P)H-dependent flavin containing monooxygenases (FMOs) using natural variation within the phosphate binding loop. Structure and activity of FMOs from Cellvibrio sp. BR and Pseudomonas stutzeri NF13. Journal of molecular catalysis. B, Enzymatic, 109. 191-198. https://doi.org/10.1016/j.molcatb.2014.08.019

Pagarete, A, Kusonmano, K, Petersen, K, Kimmance, SA, Martinez Martinez, J, Wilson, WH, Hehemann, J-H, Allen, MJ and Sandaa, R-A 2014 Dip in the gene pool: metagenomic survey of natural coccolithovirus communities. Virology, 466-46. 129-37. https://doi.org/10.1016/j.virol.2014.05.020

Nissimov, JI, Napier, JA, Kimmance, SA and Allen, MJ 2014 Permanent draft genomes of four new coccolithoviruses: EhV-18, EhV-145, EhV-156 and EhV-164. Marine Genomics, 15. 7-8. https://doi.org/10.1016/j.margen.2014.02.004

Thomas, SF, Rooks, PA, Rudin, F, Atkinson, S, Goddard, P, Bransgrove, RM, Mason, PT and Allen, MJ 2014 The bactericidal effect of dendritic copper microparticles, contained in an alginate matrix, on Escherichia coli. PloS one, 9 (5). e96225. https://doi.org/10.1371/journal.pone.0096225

Kimmance, SA, Allen, MJ, Pagarete, A, Martinez Martinez, J and Wilson, WH 2014 Reduction in photosystem II efficiency during a virus-controlled Emiliania huxleyi bloom. Marine Ecology Progress Series, 495. 65-76. https://doi.org/10.3354/meps10527

Thomas, SF, Rooks, PA, Rudin, F, Atkinson, S, Goddard, P, Bransgrove, RM, Mason, PT and Allen, MJ 2014 A comparison between ultraviolet disinfection and copper alginate beads within a vortex bioreactor for the deactivation of bacteria in simulated waste streams with high levels of colour, humic acid and suspended solids. PloS one, 9 (12). e115688. https://doi.org/10.1371/journal.pone.0115688

Reid, EL, Weynberg, KD, Love, J, Littlechild, JA, Wilson, WH, Lamb, DC, Lamb, DC and Allen, MJ 2013 Functional and Structural Characterisation of a Viral Cytochrome b5. FEBS Letters, 587 (22). 3633 - 3639. https://doi.org/10.1016/j.febslet.2013.09.035

Nissimov, JI, Jones, M, Napier, JA, Munn, CB, Kimmance, SA and Allen, MJ 2013 Functional inferences of environmental coccolithovirus biodiversity.. Virologica Sinica, 28 (5). 291 - 302. https://doi.org/10.1007/s12250-013-3362-1

Jensen, C, Ali, ST, Allen, MJ and Grogan, G 2013 Mutations of an NAD (P) H-dependent flavoprotein monooxygenase that influence cofactor promiscuity and enantioselectivity. FEBS OpenBIo, 3. 473 - 478. https://doi.org/10.1016/j.fob.2013.09.008

Pagarete, A, Lanzén, A, Puntervoll, P, Sandaa, RA, Larsen, A, Larsen, JB, Allen, MJ and Bratbak, G 2013 Genomic Sequence and Analysis of EhV-99B1, a New Coccolithovirus from the Norwegian Fjords. Intervirology, 56 (1). 60-66. https://doi.org/10.1159/000341611

Allen, MJ, Tait, K, Muhling, M, Weynberg, KD, Bradley, C, Trivedi, U, Gharbi, K, Nissimov, JI, Mavromatis, K, Jensen, C, Grogan, G and Ali, ST 2012 Genome sequence of Stenotrophomonas maltophilia PML168 which displays Baeyer-Villiger Monooxygenase activity. Journal of Bacteriology, 194 (17). 4753 - 4754. https://doi.org/10.1128/jb.00949-12

Allen, MJ and Wilson, WH 2012 Giant Viruses and their Genomes Encyclopedia of Virology Research 2012. UNSPECIFIED, 139 - 150.

Zaeuner, S, Michaelson, LV, Markham, JE, Allen, MJ, Worthy, C, Heinz, E, Warnecke, D and Napier, JA 2012 The Role of Sphingolipids in Virus-Induced Cell Lysis in Emiliania Huxleyi. Journal of Phycology, 48. 48 - 48. https://doi.org/10.1111/j.1529-8817.2012.01206.x

Jensen, C, Cartwright, J, Ward, J, Hart, S, Turkenburg, JP, Ali, ST, Allen, MJ and Grogan, G 2012 A flavoprotein monooxygenase that catalyses a Baeyer-Villiger reaction and sulfide oxidation using NADH as the nicotinamide cofactor. Chembiochem, 13. 872 - 878. https://doi.org/10.1002/cbic.201200006

Nissimov, JI, Worthy, C, Rooks, PA, Napier, JA, Kimmance, SA, Henn, MR, Ogata, H and Allen, MJ 2012 Draft Genome Sequence of Four Coccolithoviruses: Emiliania huxleyi Virus EhV-88 EhV-201 EhV-207 and EhV-208.. Journal of Virology, 86. 2896 - 2897. https://doi.org/10.1128/jvi.07046-11

Nissimov, JI, Worthy, C, Rooks, PA, Napier, JA, Kimmance, SA, Henn, MR, Ogata, H and Allen, MJ 2012 Draft genome sequence of the coccolithovirus EhV-202. Journal of Virology, 86. 2380 - 2381. https://doi.org/10.1128/jvi.06863-11

Nissimov, JI, Worthy, C, Rooks, PA, Napier, JA, Kimmance, SA, Henn, MR, Ogata, H and Allen, MJ 2011 Draft Genome Sequence of the Coccolithovirus Emiliania huxleyi Virus 203. Journal of Virology, 85 (24). 13468 - 13469. https://doi.org/10.1128/JVI.06440-11

Pagarete, A, Corguille, G, Tiwari, B, Ogata, H, de Vargas, C, Wilson, WH and Allen, MJ 2011 Unveiling the transcriptional features associated with coccolithovirus infection of natural Emiliania huxleyi blooms. FEMS Microbiology Ecology, 78. 555 - 564. https://doi.org/10.1111/j.1574-6941.2011.01191.x

Nissimov, JI, Worthy, C, Rooks, PA, Napier, JA, Kimmance, SA, Henn, MR, Ogata, H and Allen, MJ 2011 Draft genome sequence of the coccolithovirus EhV-84. Standards in Genomic Science, 5. 01-Nov. https://doi.org/10.4056/sigs.1884581

Allen, MJ 2011 The (Co)-Evolutionary Ecology of Viruses. In: Hurst, C.J., (ed.) Studies in Viral Ecology: Animal Host Systems, Volume 2. Hoboken, NJ, USA, John Wiley & Sons, Inc., 131 - 144.

Wilson, WH and Allen, MJ 2011 Viruses of Eukaryotic Algae. In: Hurst, C.J., (ed.) Viral Ecology: Microbial and Botanical Host Systems, Volume 1. Hoboken, NJ, USA, John Wiley & Sons, Inc, 189 - 204.

Allen, MJ and Pagarete, A 2011 The biochemistry of the undead. The Biochemist. 02-Mar.

Weynberg, KD, Allen, MJ, Gilg, IC, Scanlan, DJ and Wilson, WH 2011 Genome Sequence of Ostreococcus tauri Virus OtV-2 Throws Light on the Role of Picoeukaryote Niche Separation in the Ocean. Journal of Virology, 85. 4520 - 4529. https://doi.org/10.1128/JVI.02131-10

Sayanova, O, Haslam, RP, Lopez, NR, Worthy, C, Rooks, PA, Allen, MJ and Napier, JA 2011 Identification and functional characterisation of genes encoding the omega-3 polyunsaturated fatty acid biosynthetic pathway from the coccolithophore Emiliania huxleyi. Phytochemistry, 72. 594 - 600. https://doi.org/10.1016/j.phytochem.2011.01.022

Reid, EL, Worthy, C, Probert, I, Ali, ST, Love, J, Napier, JA, Littlechild, JA, Somerfield, PJ and Allen, MJ 2011 Coccolithophores: Functional Biodiversity Enzymes and Bioprospecting. Marine Drugs, 4. 586 - 602. https://doi.org/10.3390/md9040586

Temperton, B, Thomas, S, Tait, K, Parry, HE, Emery, M, Allen, MJ, Quinn, JP, McGrath, JW and Gilbert, JA 2011 Permanent draft genome sequence of Vibrio tubiashii strain NCIMB 1337 (ATCC19106). Standards in Genomic Science, 4. 183 - 190. https://doi.org/10.4056/sigs.1654066

Allen, MJ, Lanzén, A and Bratbak, G 2011 Characterisation of the coccolithovirus intein. In: UNSPECIFIED UNSPECIFIED, 01-Jul.

Allen, MJ and Wilson, WH 2011 Viruses of Algae (Phycodnaviruses). In: UNSPECIFIED UNSPECIFIED, 325 - 341.

Fischer, MG, Allen, MJ, Wilson, WH and Suttle, C 2010 Giant virus with a remarkable complement of genes infects marine zooplankton. Proceeding of the National Academy of Sciences, 107 (45). 19508 - 19513. https://doi.org/10.1073/pnas.1007615107

Allen, MJ 2010 The Response of E. coli to the Biocide Polyhexamethylene Biguanide. UNSPECIFIED, 1 - 300.

Kegel, J, Blaxter, ML, Allen, MJ, Metfies, K, Wilson, WH and Valentin, K 2010 Transcriptional host-virus interaction of Emiliania huxleyi (Haptophyceae) and EhV-86 deduced from combined analysis of expressed sequence tags and microarrays. European Journal of Phycology, 45 (1). 01-Dec. https://doi.org/10.1080/09670260903349900

Allen, MJ, Tiwari, B, Futschik, M and Lindell, D 2010 The Construction Of Microarrays And Their Application To Virus Analysis. Limnology and Oceanography Methods. 34 - 56.

Carvalho, GR, Creer, S, Allen, MJ, Costa, FO, Tsigenopoulos, CS, Le Goff-Vitry, M, Magoulas, A, Medlin, LK and Metfies, K 2010 Genomics in the discovery and monitoring of marine biodiversity. In: UNSPECIFIED UNSPECIFIED, Jan-32.

Querellou, J, Cadoret, JP, Allen, MJ and Collen, J 2010 Marine Biotechnology. In: UNSPECIFIED UNSPECIFIED, 281 - 308.

Weynberg, KD, Allen, MJ, Ashelford, K, Scanlan, DJ and Wilson, WH 2009 From small hosts come big viruses: the complete genome of a second Ostreococcus tauri virus OtV-1. Environmental Microbiology, 11. 2821 - 2839. https://doi.org/10.1111/j.1462-2920.2009.01991.x

Pagarete, A, Allen, MJ, Wilson, WH, Kimmance, SA and de Vargas, C 2009 Host-virus shift of the sphingolipid pathway along an Emiliania huxleyi bloom: survival of the fattest. Environmental Microbiology, 11. 2840 - 2848. https://doi.org/10.1111/j.1462-2920.2009.02006.x

Monier, A, Pagarete, A, de Vargas, C, Allen, MJ, Read, B, Claverie, J-M and Ogata, H 2009 Horizontal gene transfer of an entire metabolic pathway between a eukaryotic alga and its DNA virus. Genome Research, 19. 1441 - 1449. https://doi.org/10.1101/gr.091686.109

Allen, MJ and Jaspars, M 2009 Realising the potential of marine biotechnology: challenges and opportunities. Industrial Biotechnology, 5. 01-Jul.

Allen, MJ, Cossins, A, Hall, N, Blaxter, ML, Burke, T and Field, D 2009 Use of microarrays to study environmentally relevant organisms: a UK perspective. Environmental Research Journal, 4. Jan-16.

Wilson, WH and Allen, MJ 2009 Giant viruses and their Genomes. In: Feng, Zhi; Long, Ming, (eds.) Viral Genomes: Diversity, Properties and Parameters. Nova Publishers, 145 - 157.

Wilson, WH, van Etten, JL and Allen, MJ 2009 The Phycodnaviridae: The Story of How Tiny Giants Rule the World. UNSPECIFIED, Jan-42.

Frada, M, Probert, I, Allen, MJ, Wilson, WH and de Vargas, C 2008 The Cheshire Cat escape strategy of the coccolithophore Emiliania huxleyi in response to viral infection. Proceeding of the National Academy of Sciences. 15944 - 15949. https://doi.org/10.1073/pnas.0807707105

Allen, MJ, van Etten, JL and Wilson, WH 2008 The Phycodnaviridae: The story of how tiny giants rule the world.. Current Topics in Microbiology and Immunology: Lesser Known Large dsDNA Viruses edited by Jim van Etten. Jan-42.

Allen, MJ, Cossins, A, Hall, N, Blaxter, ML, Burke, T and Field, D 2008 Use of arrays with non-model organisms: a UK perspective.. In: UNSPECIFIED UNSPECIFIED, 405 - 420.

Allen, MJ and Wilson, WH 2008 Aquatic virus diversity accessed through omic techniques: A route map to function. Current Opinion in Microbiology, 11. 226 - 232. https://doi.org/10.1016/j.mib.2008.05.004

Field, D, Garrity, G, Gray, T, Morrison, N, Selengut, J, Sterk, P, Tatusova, T, Thomson, N, Allen, MJ, Angiuolii, SV, Ashburner, M, Axelrod, N, Baldauf, S, Ballard, S, Boore, J, Cochrane, G, Cole, JR, Dawyndt, P, de Vos, P, de Pamphillis, C, Edwards, R, Faruque, N, Feldman, R, Gilbert, JA, Gilna, P, Glockner, FO, Goldstein, P, Guralnick, R, Haft, D, Hancock, D, Hermjakob, H, Hertz-Fowler, C, Hugenholtz, P, Joint, IR, Kagan, L, Kane, M, Kennedy, J, Kowalchuk, G, Kottmann, R, Kolker, E, Kravitz, S, Kyrpides, N, Leebans-Mack, J and Lewis, SC 2008 The minimum information about a genome sequence (MIGS) specification. Nature Biotechnology, 26. 541 - 547. https://doi.org/10.1038/nbt1360

Allen, MJ, Howard, JA, Lilley, KS and Wilson, WH 2008 Proteomic analysis of the EhV-86 virion. Proteome Science, 6. 0 - 0. https://doi.org/10.1186/1477-5956-6-11

Kegel, J, Allen, MJ, Metfies, K, Wilson, WH, Wolf-Gladrow, D and Valentin, K 2007 Pilot study of an EST approach of the coccolithophorid Emiliania huxleyi during a virus infection. Gene, 406. 209 - 216. https://doi.org/10.1016/j.gene.2007.10.007

Allen, MJ, Martinez Martinez, J, Schroeder, DC, Somerfield, PJ and Wilson, WH 2007 Use of microarrays to assess viral diversity: from genotype to phenotype. Environmental Microbiology, 9. 971 - 982. https://doi.org/10.1111/j.1462-2920.2006.01219.x

Han, G, Gable, K, Yan, L, Allen, MJ, Wilson, WH, Moitra, M, Harmon, JM and Dunn, TM 2006 Expression of a novel marine viral single-chain serine palmitoyltransferase and construction of yeast and mammalian single-chain chimera. Journal of Biological Chemistry, 281. 39935 - 39942. https://doi.org/10.1074/jbc.M609365200

Allen, MJ 2006 Long live viruses. New Scientist, 192. 73 - 73.

Allen, MJ and Wilson, WH 2006 The coccolithovirus microarray: an array of uses.. Briefings in Functional Genomics and Proteomics, 5. 273 - 279. https://doi.org/10.1093/bfgp/ell033

Allen, MJ, Schroeder, DC, Forster, T, Hall, M, Roy, D, Ghazal, P and Wilson, WH 2006 Locus-specific gene expression pattern suggests a unique propagation strategy for a giant algal virus. Journal of Virology, 80 (15). 7699 - 7705. https://doi.org/10.1128/JVI.00491-06

Morrison, N, Wood, AJ, Hancock, D, Shah, S, Hakes, L, Gray, T, Tiwari, B, Kille, P, Cossins, A, Hegarty, M, Allen, MJ, Wilson, WH, Olive, P, Last, K, Kramer, C, Bailhache, T, Reeves, J, Pallet, D, Warne, J, Nashar, K, Parkinson, H, Sansone, S, Rocca-Serra, P, Stevens, R, Snape, J, Field, D and Brass, A 2006 Annotation of environmental OMICS data: Application to the transcriptomics domain. OMICS: A Journal of Integrative Biology, 10 (2). 172 - 178. https://doi.org/10.1089/omi.2006.10.172

Allen, MJ, White, GF and Morby, AP 2006 The Response of Escherichia coli to Exposure to the Biocide Polyhexamethylene Biguanide. Microbiology-SGM, 152. 989 - 1000.

Allen, MJ, Schroeder, DC, Donkin, A, Crawfurd, KJ and Wilson, WH 2006 Genome Comparison of Two Coccolithoviruses. Virology Journal, 03:15. 0 - 0. https://doi.org/10.1186/1743-422X-3-15

Allen, MJ, Schroeder, DC and Wilson, WH 2006 Preliminary characterisation of repeat families in the genome of EhV-86 a giant algal virus that infects the marine microalga Emiliania huxleyi. Archives of Virology, 151. 525 - 535. https://doi.org/10.1007/s00705-005-0647-1

Allen, MJ, Schroeder, DC, Holden, MTG and Wilson, WH 2006 Evolutionary History of the Coccolithoviridae. Molecular Biology and Evolution, 23 (1). 86 - 92. https://doi.org/10.1093/molbev/msj010

Wilson, WH, Schroeder, DC, Allen, MJ, Holden, MTG, Parkhill, J, Barrell, BG, Churcher, C, Hamlin, N, Mungall, K, Norbertczak, H, Quail, MA, Price, C, Rabbinowitsch, E, Walker, D, Craigon, M, Roy, D and Ghazal, P 2005 Complete genome sequence and lytic phase transcription profile of a Coccolithovirus. Science, 309. 1090 - 1092. https://doi.org/10.1126/science.1113109

Allen, MJ, Morby, AP and White, GF 2004 Cooperativity in the binding of the cationic biocide polyhexamethylene biguanide to nucleic acids. Biochemical and Biophysical Research Communications, 318. 397 - 404.