Items where Author is "Medlin, LK"

Medlin, LK, García-Portela, M, Rossignoli, AE and Reguera, B 2024 A biosensor monitoring approach for toxic algae: Construction of calibration curves to infer cell numbers in field material. Harmful Algae, 138. https://doi.org/10.1016/j.hal.2024.102697

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Mengs, G, Stern, RF, Clarke, JL, Faith, M and Medlin, LK 2024 Mapping selected emergent marine toxin-producing organisms using historical samples with two methods (biosensors and real-time PCR): a comparison of resolution [in special issue: Exclusive Papers Collection of Editorial Board Members and Invited Scholars in Applied Microbiology (2023, 2024)] Applied Microbiology, 4 (1). 312-328. https://doi.org/10.3390/applmicrobiol4010021

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Gruber, A and Medlin, LK 2023 Complex Plastids and the Evolution of the Marine Phytoplankton [in special issue: Marine Phytoplankton and Their Evolution] Journal of Marine Science and Engineering, 11 (10). https://doi.org/10.3390/jmse11101903

Robla, J, García-Hierro, J, Alguacil, FJ, Dittami, S, Marie, D, Deragon, E, Medlin, LK, Villa, E, Guillebault, E and Mengs, D 2021 Determination of the Efficiency of Filtration of Cultures from Microalgae and Bacteria using Hollow Fiber Filters. Environmental Science: Water Research & Technology (7). 1230-1239. https://doi.org/10.1039/D0EW00927J

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Medlin, LK and Desdevises, Y 2020 Review of the phylogenetic reconstruction of the diatoms using molecular tools with an analysis of a seven gene data set using multiple outgroups and morphological data for a total evidence approach. Phycologia. (In Press)

Medlin, LK and Guillebault, D. 2019 Application of the µAqua microarray for pathogenic organisms across a marine/freshwater interface. Harmful Algae, 92. https://doi.org/10.1016/j.hal.2019.101703

Medlin, LK 2019 The nomenclature and type locality of Berkeleya adeliensis (Bacillariophyceae): a correction. Plant Ecology and Evolution, 152. 409-411. https://doi.org/10.5091/plecevo.2019.1610

Barra Caracciolo, A, Dejana, L, Fajardo, C, Grenni, P, Martin, M, Mengs, G, Sanchez-Fortun, S., Lettieri, T., Sacca, ML and Medlin, LK 2019 A new fluorescent oligonucleotide probe for in-situ identification of Microcystis aeruginosa in freshwater.. Microchemical Journal, 148. 503-513. https://doi.org/10.1016/j.microc.2019.05.017

Medlin, LK and Juggins, S 2018 Multivariate Analyses Document Host Specificity, Differences in Metaphyton vs. Epiphyton, and Seasonality to Structure the Diatom Community Associated with Macroalgae. Esturaine and Coastal Marine Science, 213. 314-330. https://doi.org/10.1016/j.ecss.2018.06.011

Medlin, LK and Juggins, S 2018 Multivariate analyses document host specificity, differences in the diatom metaphyton vs. epiphyton, and seasonality that structure the epiphytic diatom community. Estuarine, Coastal and Shelf Science, 213. 314-330. https://doi.org/10.1016/j.ecss.2018.06.011

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Medlin, LK 2018 CYANO RT-Microarray: A Novel Tool to Detect Gene Expression in Cyanobacteria. Journal of Environmental Microbiology, 1 (1). 17-21.

Doucette, GJ, Medlin, LK, McCarron, P and Hess, P 2018 Detection and Surveillance of Harmful Algal Bloom Species and Toxins. In: Morton, SL; Burkholder, JAM; Shumway, SE, (eds.) Harmful Algal Blooms. Wiley, 39-114.

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Edvardsen, B, Lundholm, N and Medlin, LK 2018 Tribute to Professor Grethe Rytter Hasle. Diatom Research, 33 (1). 117-122. https://doi.org/10.1080/0269249X.2018.1451392

Engesmo, A, Strand, D, Gran-Stadniczeñko, S, Edvardsen, B, Medlin, LK and Eikrem, W 2018 Development of a qPCR assay to detect and quantify ichthyotoxic flagellates along the Norwegian coast, and the first Norwegian record of Fibrocapsa japonica (Raphidophyceae). Harmful Algae, 75. 105-117. https://doi.org/10.1016/j.hal.2018.04.007

Engesmo, A, Strand, D, Gran-Stadniczeñko, S, Edvardsen, B, Medlin, LK and Eikrem, W 2018 Development of a qPCR assay to detect and quantify ichthyotoxic flagellates along the Norwegian coast, and the first Norwegian record of Fibrocapsa japonica (Raphidophyceae).. Harmful Algae, 75 (May). 105-117. https://doi.org/10.1016/j.hal.2018.04.007

Medlin, LK 2018 Obituary – Greta A. Fryxell. Diatom Research, 33 (1). 123-133. https://doi.org/10.1080/0269249X.2017.1419988

Medlin, LK 2018 Mini Review: Diatom species as seen through a molecular window. Brazilian Journal of Botany, 41. 457-469. https://doi.org/10.1007/s40415-018-0444-1

Van de Waal, DB, Guillebault, D, Alfonso, A, Rodriguez, I, Botana, LM, Bijkerk, R and Medlin, LK 2018 Molecular detection of harmful cyanobacteria and expression of their toxin genes in Dutch lakes using multi-probe RNA chips. Harmful Algae, 72. 25-35. https://doi.org/10.1016/j.hal.2017.12.007

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Medlin, LK and Desdevies, Y 2018 Sequence Analysis Confirms a New Algal Class. Vie Et Milieu-Life and Environment, 68 (2-3). 151-155.

Akcaalan, R, Albay, M, Koker, L, Baudart, J, Guillebault, D, Fischer, S, Weigel, W and Medlin, LK 2018 Seasonal dynamics of freshwater pathogens as measured by microarray at Lake Sapanca, a drinking water source in the north-eastern part of Turkey. Environ Monit Assess. https://doi.org/10.1007/s10661-017-6314-7

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Medlin, LK, Guillebault, D, Mengs, G, Garbi, C, Dejana, L, Fajardo, C and Martin, M 2017 New molecular tools: application of the μAQUA phylochip and concomitant FISH probes to study freshwater pathogens from samples taken along the Tiber River, Italy. WIT Transactions on Ecology and the Environment, 221. 109-122. https://doi.org/10.2495/RBM170121

Medlin, LK, Guillebault, D, Mengs, G, Garbi, C, Dejana, L, FaJARDO, C and Martin, M 2017 New molecular tools: application of the μAQUA phylochip and concomitant FISH probes to study freshwater pathogens from samples taken along the Tiber River, Italy. In: River Basin Management 2017, Prague, Czech Republic, 19 - 21 July, 2017. WIT Transactions on the Ecology and the Environment. (In Press)

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Medlin, LK, Piwosz, K and Metfies, M 2017 Uncovering hidden biodiversity in the Cryptophyta: New picoplanktonic clades from clone library studies at the Helgoland time series site in the southern German Bight.. Vie Et Milieu-Life and Environment, 67. 27-32.

Medlin, LK and Orazco, J 2017 Molecular Techniques for the Detection of Organisms in Aquatic Environments, with Emphasis on Harmful Algal Bloom Species. [in special issue: Genosensing] SENSORS, 17 (5). https://doi.org/10.3390/s17051184

Medlin, LK 2017 Evolution of the diatoms: IX. Two datasets resolving monophyletic Classes of diatoms are used to explore the validity of adding short clone library sequences to the analysis.. European Journal of Phycology, 52 (1). 90-103. https://doi.org/10.1080/09670262.2016.1228124

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Baudart, J, Guillebault, D, Meilke, E, Meyer, T, Tandon, N, Fischer, S, Weigel, W and Medlin, LK 2017 Microarray (phylochip) analysis of freshwater pathogens at several sites along the Northern German coast transecting both estuarine and freshwaters. Applied Microbiology and Biotechnology, 101 (2). 871-886. https://doi.org/10.1007/s00253-016-7937-2

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Medlin, LK 2016 Mini Review: Molecular Techniques for Identification and Characterization of Marine Biodiversity. Annals of Marine Biology and Research, 3 (2).

Rodriguez, I, Fraga, M, Alfonso, A, Guillebault, D, Medlin, LK, Baudart, J, Jacob, P, Helmi, K, Meyer, M, Breitenbach, U, Holten, NM, Boots, B, Supiro, R, Cimarelli, L, Mancini, L, Marcheggiani, S, Albay, M, Akcaalan, R, Koker, L and Botana, LM 2016 Monitoring of freshwater toxins in European environmental waters by using novel multi-detection methods.. Environmental Toxicology and Chemistry, 9999. 1-10. https://doi.org/10.1002/etc.3577

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D'Ugo, E, Marcheggiani, S, Fioramonti, I, Giuseppetti, R, Spurio, R, Helmi, K, Guillebault, D, Medlin, LK, Simeonovski, I, Boots, B, Breitenbach, U, Koker, L, Albay, M and Mancini, L 2016 Detection of Human Enteric Viruses in Freshwater from European Countries. Food and Environmental Virology, 8 (3). 206-214. https://doi.org/10.1007/s12560-016-9238-4

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Orozco, J, Villa, E, Manes, CL, Medlin, LK and Guillebault, D 2016 Electrochemical RNA genosensors for toxic algal species: enhancing selectivity and sensitivity. Talanta, 161. 560-566. https://doi.org/10.1016/j.talanta.2016.08.073

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Eikrem, W, Medlin, LK, Henderiks, J, Rokitta, S, Rost, B, Probert, I, Throndsen, J and Edvardsen, B 2016 Haptophyta. In: Archibald, JM; Simpson, AGB; Slamovits, CH; Margulis, L; Melkonian, M; Chapman, DJ; Corliss, JO, (eds.) Handbook of the Protists. Switzerland, Springer International Publishing, 1-61.

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Medlin, LK and Desdevies, Y 2016 Phylogeny of ‘araphid’ diatoms inferred from SSU and LSU rDNA, rbcL and psbA sequences. Vie et Milieu, 66 (2). 129-154.

McNamee, SE, Medlin, LK, Kegel, JU, McCoy, GR, Raine, R, Barra, L, Ruggiero, MV, Kooistra, WHCF, Montresor, M, Hagstrom, J, Blanco, EP, Graneli, E, Rodriguez, R, Esclaera, L, Reguera, B, Dittami, S, Edvardsen, B, Taylor, J, Lewis, JM, Pazos, Y, Elliott, CT and Campbell, K 2016 Distribution, occurrence and biotoxin composition of the main shellfish toxin producing microalgae within European waters: A comparison of methods of analysis.. Harmful Algae, 55. 112-120. https://doi.org/10.1016/j.hal.2016.02.008

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Kegel, JU, Guillebault, D and Medlin, LK 2016 Application of microarrays (phylochips) for analysis of community diversity by species identification. Perspectives in Phycology. https://doi.org/10.1127/pip/2016/0048

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Greer, B, McNamee, SE, Boots, B, Cimarelli, L, Guillebault, D, Helmi, K, Marcheggiani, S, Panaiotov, S, Breitenbach, U, Akcaalan, R, Medlin, LK, Kittler, K, Elliott, CT and Campbell, K 2016 A validated UPLC–MS/MS method for the surveillance of ten aquatic biotoxins in European brackish and freshwater systems. Harmful Algae, 55. 31-40. https://doi.org/10.1016/j.hal.2016.01.006

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Medlin, LK 2016 Evolution of the diatoms: major steps in their evolution and a review of the supporting molecular and morphological evidence.. Phycologia, 55 (1). 79-103. https://doi.org/10.2216/15-105.1

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Medlin, LK 2015 A timescale for diatom evolution based on four molecular markers: reassessment of ghost lineages and major steps defining diatom evolution.. Vie Et Milieu-Life and Environment.

Lindemann, C, Ashworth, M, Witkowski, A, Dabek, P, Medlin, LK, Kooistra, WHCF, Sato, S, Zglobicka, I, Kurzydlowski, KJ, Theriot, EC, Sabir, JSM, Khiyami, MA, Mutwakil, MHZ, Sabir, MH, Alharbi, NS, Hajarah, NH, Qing, S and Jansen, JK 2015 New insights into Plagiogrammaceae (Bacillariophyta) based on multigene phylogenies and morphological characteristics with the description of a new genus and three new species.. PLoS one. https://doi.org/10.1371/journal.pone.0139300.

Marcheggiani, M, D'Ugo, E, Puccinelli, C, Giuseppetti, R, D'Angelo, AM, Claudio Orlando Gualerzi, CO, Spurio, R, Medlin, LK, Guillebault, D, Weigel, W, Helmi, K and Mancini, L 2015 Detection of Emerging and Re-Emerging Pathogens in Surface Waters Close to an Urban Area. International Journal of Environmental Research and Public Health, 12 (5). 5505-5527. https://doi.org/10.3390/ijerph120505505

Medlin, LK 2015 Opinion: Can coalescent models explain deep divergences in the diatoms and argue for the acceptance of paraphyletic taxa at all taxonomic hierarchies?. Nova Hedwigia, 102 (1-2). 107-128. https://doi.org/10.1127/nova_hedwigia/2015/0295

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Herrera-Sepulveda, A, Medlin, LK, Murugan, G, Sierra-Beltran, AP, Cruz-Villacorta, AA and Hernandez-Saavedra, NY 2015 Are Prorocentrum hoffmannianum and Prorocentrum belizeanum (Dinophyceae, Prorocentrales), the same species? An integration of morphological and molecular data.. Journal of Phycology, 51 (1). 173-188. https://doi.org/10.1111/jpy.12265

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Gaebler-Schwarz, S, Medlin, LK and Leese, F 2015 A puzzle with many pieces: the genetic structure and diversity of Phaeocystis antarctica Karsten (Prymnesiophyta). European Journal of Phycology, 50. 112-124. https://doi.org/10.1080/09670262.2014.998295

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Medlin, LK 2014 Evolution of the Diatoms: VIII. Re-Examination of the SSU-Rrna Gene Using Multiple Outgroups and a Cladistic Analysis of Valve Features.. Journal of Biodiversity, Bioprospecting and Development, 1 (3). 1-16. https://doi.org/10.4172/2376-0214.1000129

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Taylor, JD, Kegel, JU, Lewis, JM and Medlin, LK 2014 Validation of the detection of Alexandrium species using specific RNA probes tested in a microarray format: Calibration of signal using variability of RNA content with environmental conditions.. Harmful Algae, 37. 17-27. https://doi.org/10.1016/j.hal.2014.05.001

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Medlin, LK and Kegel, JU 2014 Validation of the detection of Pseudo-nitzschia spp. using specific RNA probes tested in a microarray format: Calibration of signal based on variability of RNA content with environmental conditions.. Harmful Algae, 37. 183-193. https://doi.org/10.1016/j.hal.2014.05.016

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McCoy, GR, Kegel, JU, Touzet, N, Fleming, GTA, Medlin, LK and Raine, R 2014 An assessment of RNA content in Prymnesium parvum, Prymnesium polylepis, cf. Chattonella sp. and Karlodinium veneficum under varying environmental conditions for calibrating an RNA microarray for species detection.. Federation of European Microbiological Societies, 88 (1). 140-159. https://doi.org/10.1111/1574-6941.12277

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Carvalho, GR, Creer, S, Allen, MJ, Costa, FO, Tsigenopoulos, CS, Le Goff-Vitry, M, Magoulas, A, Medlin, LK and Metfies, K 2010 Genomics in the discovery and monitoring of marine biodiversity. In: UNSPECIFIED UNSPECIFIED, Jan-32.

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Jonker, RR, Groben, R, Tarran, GA, Medlin, LK, Wilkins, MF, Garcia, L, Zabala, L and Boddy, L 2000 Automated identification and characterisation of microbial populations using flow cytometry: the AIMS project. Scientia Marina, 64 (2). 225 - 234.

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