Browse by PML Authors

Mata, A, Moffat, D, Almeida, S, Radeta, M, Jay, W, Mortimer, N, Awty-Carroll, K, Thomas, OR, Brotas, V and Groom, SB 2024 Drone imagery and deep learning for mapping the density of wild Pacific oysters to manage their expansion into protected areas. Ecological Informatics, 82. 1-12. https://doi.org/10.1016/j.ecoinf.2024.102708

Rees, AP, Smyth, TJ and Brotas, V 2024 Editorial: The Atlantic Meridional Transect programme (1995-2023). Frontiers in Marine Science, 11. https://doi.org/10.3389/fmars.2024.1358174

Guerreiro, CV, Ferreira, A, Cros, L, Stuut, J-B, Baker, AR, Tracana, A, Pinto, C, Veloso, V, Rees, AP, Cachão, MAP, Nunes, T and Brotas, V 2023 Response of coccolithophore communities to oceanographic and atmospheric processes across the North- and Equatorial Atlantic. Frontiers in Marine Science, 10. https://doi.org/10.3389/fmars.2023.1119488

Valente, A, Sathyendranath, S, Brotas, V, Groom, SB, Grant, MG, Jackson, T, Chuprin, A, Taberner, M, Airs, RL, Antoine, D, Arnone, R, Balch, WM, Barker, K, Barlow, R, Bélanger, S, Berthon, J-F, Beşiktepe, Ş, Borsheim, Y, Bracher, A, Brando, V, Brewin, RJW, Canuti, E, Chavez, FP, Cianca, A, Claustre, H, Clementson, LA, Crout, R, Ferreira, AS, Freeman, S, Frouin, R, Garcia-Soto, C, Gibb, SW, Goericke, R, Gould, R, Guillocheau, N, Hooker, SB, Hu, C, Kahru, M, Kampel, M, Klein, H, Kratzer, S, Kudela, R, Ledesma, J, Lohrenz, S, Loisel, H, Mannino, A, Martinez-Vicente, V, Matrai, P, McKee, D, Mitchell, BG, Moisan, T, Montes, E, Muller-Karger, F, Neeley, AR, Novak, M, O'Dowd, L, Ondrusek, M, Platt, T, Poulton, AJ, Repecaud, M, Röttgers, R, Schroeder, T, Smyth, TJ, Smythe-Wright, D, Sosik, HM, Thomas, C, Thomas, R, Tilstone, GH, Tracana, A, Twardowski, M, Vellucci, V, Voss, K, Werdell, J, Wernand, M, Wojtasiewicz, B, Wright, S and Zibordi, G 2022 A compilation of global bio-optical in situ data for ocean colour satellite applications – version three. Earth System Science Data, 14 (12). 5737-5770. https://doi.org/10.5194/essd-14-5737-2022

Sun, X, Brewin, RJW, Sathyendranath, S, Dall’Olmo, G, Airs, RL, Barlow, RG, Bracher, A, Brotas, V, Kheireddine, M, Lamont, T, Maranon, E, Moran, XAG, Raitsos, DE, Shen, F and Tilstone, GH 2022 Coupling ecological concepts with an ocean-colour model: Phytoplankton size structure. Remote Sensing of Environment, 285. 113415. https://doi.org/10.1016/j.rse.2022.113415

Brotas, V, Tarran, GA, Veloso, V, Brewin, RJW, Woodward, EMS, Airs, RL, Beltran, C, Ferreira, AS and Groom, SB 2022 Complementary Approaches to Assess Phytoplankton Groups and Size Classes on a Long Transect in the Atlantic Ocean. Frontiers in Marine Science, 8. https://doi.org/10.3389/fmars.2021.682621

Martinez-Vicente, V, Kurekin, A, Sa, C, Brotas, V, Amorim, AL, Veloso, V, Lin, J and Miller, PI 2020 Sensitivity of a Satellite Algorithm for Harmful Algal Bloom Discrimination to the Use of Laboratory Bio-optical Data for Training. Frontiers in Marine Science, 7. https://doi.org/10.3389/fmars.2020.582960

Sathyendranath, S, Brewin, RJW, Brockmann, C, Brotas, V, Calton, B, Chuprin, A, Cipollini, P, Couto, A, Dingle, J, Doerffer, R, Donlon, C, Dowell, M, Farman, A, Grant, MG, Groom, S, Horseman, A, Jackson, T, Krasemann, H, Lavender, S, Martinez-Vicente, V, Mazeran, C, Mélin, F, Moore, T, Müller, D, Regner, P, Roy, S, Steele, C, Steinmetz, F, Swinton, J, Taberner, M, Thompson, A, Valente, A, Zühlke, M, Brando, V, Feng, H, Feldman, G, Franz, B, Frouin, R, Gould, R, Hooker, S, Kahru, M, Kratzer, S, Mitchell, B, Muller-Karger, F, Sosik, H, Voss, K, Werdell, J and Platt, T 2019 An Ocean-Colour Time Series for Use in Climate Studies: The Experience of the Ocean-Colour Climate Change Initiative (OC-CCI). Sensors, 19 (19). 4285. https://doi.org/10.3390/s19194285

Groom, SB, Sathyendranath, S, Ban, Y, Bernard, S, Brewin, RJW, Brotas, V, Brockmann, C, Chauhan, P, Choi, J-K, Chuprin, A, Ciavatta, S, Cipollini, P, Donlon, CJ, Franz, BA, He, X, Hirata, T, Jackson, T, Kampel, M, Krasemann, H, Lavender, SJ, Pardo-Martinez, S, Melin, F, Platt, T, Santoleri, R, Skákala, J, Schaeffer, B, Smith, M, Steinmetz, F, Valente, A and Wang, M 2019 Satellite Ocean Colour: Current Status and Future Perspective. Frontiers in Marine Science, 6. https://doi.org/10.3389/fmars.2019.00485

Valente, A, Sathyendranath, S, Brotas, V, Groom, SB, Grant, MG, Taberner, M, Antoine, D, Arnone, R, Balch, WM, Barker, K, Barlow, R, Bélanger, S, Berthon, JF, Beşiktepe, Ş, Borsheim, Y, Bracher, A, Brando, V, Canuti, E, Chavez, F, Cianca, A, Claustre, H, Clementson, LA, Crout, R, Frouin, R, Garcia-Soto, C, Gibb, SW, Gould, R, Hooker, SB, Kahru, M, Kampel, M, Klein, H, Kratzer, S, Kudela, R, Ledesma, J, Loisel, H, Matrai, P, McKee, D, Mitchell, BG, Moisan, T, Muller-Karger, F, O'Dowd, L, Ondrusek, M, Platt, T, Poulton, AJ, Repecaud, M, Schroeder, T, Smyth, TJ, Smythe-Wright, D, Sosik, HM, Twardowski, M, Vellucci, V, Voss, K, Werdell, J, Wernand, M, Wright, S and Zibordi, G 2019 A compilation of global bio-optical in situ data for ocean-colour satellite applications – version two. Earth System Science Data, 11 (3). 1037-1068. https://doi.org/10.5194/essd-11-1037-2019

Maeda, EE, Lisboa, F, Kaikkonen, L, Kallio, K, Koponen, S, Brotas, V and Kuikka, S 2019 Temporal patterns of phytoplankton phenology across high latitude lakes unveiled by long-term time series of satellite data. Remote Sensing of Environment, 221. 609-620. https://doi.org/10.1016/j.rse.2018.12.006

Lobanova, P, Tilstone, GH, Bashmachnikov, I and Brotas, V 2018 Accuracy assessment of primary production models with and without photoinhibition using Ocean Colour Climate Change Initiative data in the North East Atlantic Ocean. [in special issue: Ocean Colour] Remote Sensing, 10 (7), 1116. https://doi.org/10.3390/rs10071116

Brewin, RJW, Ciavatta, S, Sathyendranath, S, Jackson, T, Tilstone, GH, Curran, K, Airs, RL, Cummings, DG, Brotas, V, Organelli, E, Dall’Olmo, G and Raitsos, DE 2017 Uncertainty in ocean-colour estimates of chlorophyll for phytoplankton groups. Frontiers in Marine Science, 4 (104). https://doi.org/10.3389/fmars.2017.00104

Bracher, A, Bouman, H, Brewin, RJW, Bricaud, A, Brotas, V, Ciotti, AM, Clementson, LA, Devred, E, Di Cicco, A, Dutkiewicz, S, Hardman-Mountford, NJ, Hickman, A, Hieronymi, M, Hirata, T, Losa, S. N, Mouw, C, Organelli, E, Raitsos, DE, Uitz, J, Vogt, M and Wolanin, A 2017 Obtaining Phytoplankton Diversity from Ocean Color: A Scientific Roadmap for Future Development. Frontiers in Marine Science, 4. 55, pp. https://doi.org/10.3389/fmars.2017.00055

Valente, A, Sathyendranath, S, Brotas, V, Groom, SB, Grant, MG, Taberner, M, Antoine, D, Arnone, R, Balch, WM, Barker, K, Barlow, R, Bélanger, S, Berthon, J-F, Beşiktepe, Ş, Brando, V, Canuti, E, Chavez, F, Claustre, H, Crout, R, Frouin, R, Garcia-Soto, C, Gibb, SW, Gould, R, Hooker, S, Kahru, M, Klein, H, Kratzer, S, Loisel, H, McKee, D, Mitchell, BG, Moisan, T, Muller-Karger, F, O'Dowd, L, Ondrusek, M, Poulton, AJ, Repecaud, M, Smyth, TJ, Sosik, HM, Twardowski, M, Voss, K, Werdell, J, Wernand, M and Zibordi, G 2016 A compilation of global bio-optical in situ data for ocean-colour satellite applications. Earth System Science Data, 8 (1). 235-252. https://doi.org/10.5194/essd-8-235-2016

Nechad, B, Ruddick, KG, Schroeder, T, Oubelkheir, K, Blondeau-Patissier, D, Cherukuru, RCN, Brando, VE, Dekker, AG, Clementson, LA, Banks, AC, Maritorena, S, Werdell, J, Sa, C, Brotas, V, Caballero de Frutos, I, Ahn, Y-H, Salama, S, Tilstone, GH, Martinez-Vicente, V, Foley, D, McKibben, M, Nahorniak, J, Peterson, T, Silio-Calzada, A, Röttgers, R, Lee, ZP, Peters, M and Brockmann, C 2015 CoastColour Round Robin datasets: a database to evaluate the performance of algorithms for the retrieval of water quality parameters in coastal waters.. Earth System Science Data, 7. 319-348. https://doi.org/10.5194/essd-7-319-2015

Brewin, RJW, Sathyendranath, S, Jackson, T, Barlow, RG, Brotas, V, Airs, RL and Lamont, T 2015 Influence of light in the mixed-layer on the parameters of a three-component model of phytoplankton size class. Remote Sensing of Environment, 168. 437-450. https://doi.org/10.1016/j.rse.2015.07.004

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Brito, AC, Sá, C, Brotas, V, Brewin, RJW, Silva, T, Vitorino, J, Platt, T and Sathyendranath, S 2015 Effect of phytoplankton size classes on bio-optical properties of phytoplankton in the Western Iberian coast: Application of models. Remote Sensing of Environment, 156. 537-550. https://doi.org/10.1016/j.rse.2014.10.020

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Muacho, S, da Silva, JCB, Brotas, V, Oliveira, PB and Magalhaes, JM 2014 Chlorophyll enhancement in the central region of the Bay of Biscay as a result of internal tidal wave interaction. Journal of Marine Systems, 136. 22-30. https://doi.org/10.1016/j.jmarsys.2014.03.016

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Muacho, S, da Silva, JCB, Brotas, V and Oliveira, PB 2013 Effect of internal waves on near-surface chlorophyll concentration and primary production in the Nazare Canyon (west of the Iberian Peninsula). Deep Sea Research Part I: Oceanographic Research Papers, 81. 89 - 96. https://doi.org/10.1016/j.dsr.2013.07.012

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Brotas, V, Brewin, RJW, Sa, C, Brito, AC, Silva, A, Mendes, CR, Diniz, T, Kaufmann, M, Tarran, GA, Groom, SB, Platt, T and Sathyendranath, S 2013 Deriving phytoplankton size classes from satellite data: Validation along a trophic gradient in the eastern Atlantic Ocean. Remote Sensing of Environment, 134. 66 - 77. https://doi.org/10.1016/j.rse.2013.02.013

Sa, C, Leal, MC, Silva, A, Nordez, S, André, E, Paula, J and Brotas, V 2013 Variation of phytoplankton assemblages along the Mozambique coast as revealed by HPLC and microscopy. Journal of Sea Research, 79. 1-11. https://doi.org/10.1016/j.seares.2013.01.001

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Ribeiro, L, Brotas, V, Rincé, Y and Jesus, B 2013 Structure and diversity of intertidal benthic diatom assemblages in contrasting shores: a case study from the Tagus estuary1. Journal of Phycology, 49 (2). 258-270. https://doi.org/10.1111/jpy.12031

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Silva, A, Brotas, V, Valente, A, Sa, C, Diniz, T, Patarra, RF, Álvaro, NV and Neto, AI 2013 Coccolithophore species as indicators of surface oceanographic conditions in the vicinity of Azores islands. Estuarine, Coastal and Shelf Science, 118. 50-59. https://doi.org/10.1016/j.ecss.2012.12.010

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Brito, AC, Brotas, V, Caetano, M, Coutinho, TP, Bordalo, AA, Icely, J, Neto, JM, Serodio, J and Moita, T 2012 Defining phytoplankton class boundaries in Portuguese transitional waters: An evaluation of the ecological quality status according to the Water Framework Directive. Ecological Indicators, 19. May-14. https://doi.org/10.1016/j.ecolind.2011.07.025

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Borges Mendes, CF, Silva de Souza, M, Tavano Garcia, VM, Costa Leal, M, Brotas, V and Eiras Garcia, CA 2012 Dynamics of phytoplankton communities during late summer around the tip of the Antarctic Peninsula. Deep Sea Research Part I: Oceanographic Research Papers, 65. Jan-14. https://doi.org/10.1016/j.dsr.2012.03.002

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Rodrigues, M, Oliveira, AND, Queiroga, H and Brotas, V 2012 Seasonal and diurnal water quality and ecological dynamics. Procedia Environmental Sciences, 13. 899 - 918. https://doi.org/10.1016/j.proenv.2012.01.084

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