Chromosomal Inversion Polymorphisms in Two Sympatric Ascidian Lineages

Satou, Y; Sato, A; Yasuo, H; Mihirogi, Y; Bishop, JDD; Fujie, M; Kawamitsu, M; Hisata, K; Satoh, N. 2021 Chromosomal Inversion Polymorphisms in Two Sympatric Ascidian Lineages. Genome Biology and Evolution, 13 (6). https://doi.org/10.1093/gbe/evab068

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Abstract/Summary

Chromosomal rearrangements can reduce fitness of heterozygotes and can thereby prevent gene flow. Therefore, such rearrangements can play a role in local adaptation and speciation. In particular, inversions are considered to be a major potential cause for chromosomal speciation. There are two closely related, partially sympatric lineages of ascidians in the genus Ciona, which we call type-A and type-B animals in the present study. Although these invertebrate chordates are largely isolated reproductively, hybrids can be found in wild populations, suggesting incomplete prezygotic barriers. Although the genome of type-A animals has been decoded and widely used, the genome for type-B animals has not been decoded at the chromosomal level. In the present study, we sequenced the genomes of two type-B individuals from different sides of the English Channel (in the zone of sympatry with type-A individuals) and compared them at the chromosomal level with the type-A genome. Although the overall structures were well conserved between type A and type B, chromosomal alignments revealed many inversions differentiating these two types of Ciona; it is probable that the frequent inversions have contributed to separation between these two lineages. In addition, comparisons of the genomes between the two type-B individuals revealed that type B had high rates of inversion polymorphisms and nucleotide polymorphisms, and thus type B might be in the process of differentiation into multiple new types or species. Our results suggest an important role of inversions in chromosomal speciation of these broadcasting spawners.

Item Type: Publication - Article
Additional Keywords: ciona;genomes;chromosomal speciation
Subjects: Biology
Marine Sciences
Divisions: Marine Biological Association of the UK > Knowledge Exchange
Depositing User: Tamar Atkinson
Date made live: 09 Feb 2022 14:34
Last Modified: 09 Feb 2022 14:34
URI: http://plymsea.ac.uk/id/eprint/9547

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